Maryn McKenna

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A moment of silence

November 20, 2008 By Maryn Leave a Comment

Constant readers, I am very sad to tell you that Lori Hall Steele, the writer and single mother afflicted with amyotrophic lateral sclerosis, died Wednesday. As I told you back in September, she could no longer work, could not pay her mortgage or her medical bills, and was about to lose her house to foreclosure, leaving her 7-year-old son homeless at the same time that she was about to be hospitalized with what is inevitably a fatal disease. The news prompted a blogathon on her behalf by fellow freelancers around the country that raised almost $20,000 more than $30,000, enough to ensure that her house was safe for as long as necessary.

A heartbreaking essay that she wrote about her son, before she knew she was sick, is here.

Many of you told me privately how much this story touched you. (And readers outside the US expressed shock that the cost of healthcare could turf a dying young mother out of her home.)

I send sincere thanks to all of you who sent Lori (whom I never met) money, or prayers, or warm thoughts for her and for her son. I am confident that none of it was in vain.

UPDATE: Lori’s obituary is here.

Filed Under: personal

Contributing to resistance: fake drugs?

November 18, 2008 By Maryn Leave a Comment

There’s news this morning that Interpol has seized $6.65 million of counterfeit medicines in the culmination of a 5-month undercover investigation that stretched across Cambodia, China, Laos, Myanmar, Singapore, Thailand and Vietnam. The fakes included purported antiretrovirals for HIV, anti-TB drugs, antimalarials (especially artemisinin) — and, chillingly for our purposes here, fake antibiotics for pneumonia and other bacterial illnesses.

Bloomberg News says:

Under Operation Storm, which ran from April 15 to Sept. 15, police seized more than 16 million pills…
Asia is the world’s biggest producer of all counterfeit products, the Organization for Economic Cooperation and Development said in a report last year. About 40 percent of 1,047 arrests related to fake drugs worldwide last year were made in Asia, according to the Washington-based Pharmaceutical Security Institute.
Counterfeits account for as much as 30 percent of all drugs in developing nations and less than 1 percent of all medicines in developed nations such as the U.S. (Byline Simeon Bennett.)

Counterfeiting medicines is both a huge business — the World Health Organization estimates that “counterfeit drug sales will reach US$ 75 billion globally in 2010, an increase of more than 90% from 2005” — and an appalling crime that attacks the most vulnerable people at their most vulnerable moments. In a recent issue brief, the WHO recounts a number of instances of counterfeiting that led to deaths in a number of countries.

Why should we care here? Because some counterfeits are not complete fakes; they contain a small amount of the active ingredient of the drug they purport to be. That means that, if someone takes a faked version of an antibiotic, they may not be going untreated. Instead, they may be undertreated, the exact situation that can lead to the emergence of resistance. Just last year, according to the Pharmaceutical Security Institute, known counterfeiting episodes involving anti-infective drugs rose 26%.

Now, NB: Activism against counterfeit drugs is politically complicated; it is supported by the pharma industry (PSI is a coalition of 26 manufacturers) and is tangled up with opposition to online pharmaceutical sales and to decisions by developing-world countries to abrogate Western drug patents. But that turf-defending by the pharma industry does not alter the reality that counterfeit drugs are an enormous international problem that imperil not only people unfortunate enough to take them, but anyone who contracts a resistant strain that those drugs helped foster.

And anyone concerned about MRSA will already know that resistant strains do not stay where they are generated. They have already demonstrated their ability to move rapidly around the world.

Filed Under: antibiotics, counterfeit, drug development, international

New newspaper series on HA-MRSA

November 16, 2008 By Maryn Leave a Comment

The Seattle Times this morning launched an three-day investigative project on incidence of HA-MRSA in Washington State that is worth reading.

As readers here already know, MRSA is not a reportable disease, and there are no diagnosis codes that directly correspond to MSRA that make infection or death easily trackable through hospital records or death certificates. The Times’ team came up with some innovative data-drilling techniques and apparently did a massive amount of number-crunching to come up with the incidence estimates that underpin their reporting. They use those to challenge hospitals’ reluctance to undertake surveillance and treatment that would wipe out MRSA on colonized patients and thus reduce the likelihood of MRSA infecting those patients or spreading to others via healthcare workers who neglect infection control. (NB, Michael Berens, the series’ co-author, did a huge project on nosocomial infections when he was at the Chicago Tribune a number of years ago.)

I am puzzled by one thing I am seeing on the story’s web page — one of the items in the break-out box that sums the story up very quickly to attract eyeballs to it. It says: “About 85 percent of people infected with MRSA get the germ at a hospital or other health-care facility. ” That figure doesn’t make sense to me; it sounds as though it is a mis-translation of the CDC finding a year ago (in the Klevens JAMA paper) that approximately 85% of invasive cases of MRSA have hospital-associated risk factors. Constant readers will remember that estimate has been challenged by researchers on community MRSA, who believe that CA-MRSA accounts for a much larger proportion of the current epidemic than has been acknowledged, and think that the wide spread of the community strain is the actual driver of the overall epidemic. I can’t see where in the text the Times team has done the math to support that assertion, so if anyone else spots it, or knows the reference it comes from, please let me know.

Filed Under: colonization, hand hygiene, hospitals, infection control, invasive, medical errors, nosocomial, rapid testing, surveillance

Despite stewardship efforts, antibiotic use increasing

November 11, 2008 By Maryn Leave a Comment

Well, this is bad news.

I hope we can all agree that antibiotic use creates antibiotic resistance. (Proof, if any were needed, that the universe has a captious sense of humor; but then it has had millennia to practice. OK, sorry for the anthropomorphizing.) The more pressure bacteria are placed under, the more resistant mutants emerge and survive. So the challenge in using antibiotics is to use them sufficiently and not too much: enough to quell infection and save lives, but not so much that the benefit of successful treatment is outweighed by the cost of increased resistance.

That’s the theory, anyway. In practice, according to a paper published today in the Archives of Internal Medicine, we’re not living up to the plan.

Amy L. Pakyz, Pharm.D. and colleagues at Virginia Commonwealth University surveyed antibiotic use at 22 academic medical centers — tertiary care teaching hospitals, ones that would be most likely to have high awareness of the dangers of resistance and good antibiotic stewardship programs — between 2002 and 2006. And found: Despite all that awareness, antibiotic use is going up, and the use of broad-spectrum agents and vancomycin, MRSA’s drug of last resort, is going up most of all.

The third significant observation is the marked increase in vancomycin use during the 5-year period such that it became the single most commonly used antibacterial in this sample of hospitals from 2004 to 2006. …
The reasons for the continued increase in vancomycin use are likely multifactorial, including the increasing numbers of hospital-acquired infections caused by MRSA and the emergence of community-associated MRSA, all of which encourage greater empirical use of vancomycin.

With only a few new drugs of comparative effectiveness on the market, and none that are significantly better, this is bad news, the authors underline:

Vancomycin use is a risk factor for emergence of vancomycin-intermediate S aureus and vancomycin-resistant S aureus, although these strains are rare in the United States. Of greater concern may be the emergence of low-level resistance in MRSA to vancomycin, referred to as minimum inhibitory concentration (MIC) “creep,” and this is far more common. Strains of MRSA having vancomycin MICs of 2.0 μg/mL are associated with longer median times to clearance of bacteremia compared with strains having MICs of 1.0 μg/mL or less, as well as frank treatment failures.

The cite is: Pakyz, AL et al. Trends in Antibacterial Use in US Academic Health Centers 2002 to 2006. Arch Intern Med. 2008;168(20):2254-2260.

Filed Under: antibiotics, drug development, evolution, hospitals, stewardship, vancomycin

MRSA in meat in Louisiana: pig meat, human strain

November 9, 2008 By Maryn Leave a Comment

On Nov. 3, I posted on an enterprising group of TV stations in the Pacific Northwest who had retail meat in four states tested for MRSA. I said at the time that it was the first finding of MRSA in meat in the US that I knew of.

Turns out that I was wrong by three days. On Oct. 31, the journal Applied and Environmental Microbiology published an electronic version of a study that they will be printing in the paper journal on some future date. Journals do this when a finding is so important or timely that it should see the light immediately, rather than wait through the additional weeks or months of print production.

And this finding is certainly timely. Shuaihua Pu, Feifei Han, and Beilei Ge of the Louisiana State University Agricultural Center have made what appears to be the first scientifically valid identification of MRSA in retail meat in the United States. But — and this is an important point — it is not the swine strain, ST 398, that has been found in meat in Canada and Europe, and in hospital patients in Scotland and the Netherlands, and in pigs in Iowa; and in humans in New York, though that strain was drug-sensitive.

Instead, what the researchers found (in 5 pork and 1 beef samples, out of 120 bought in 30 grocery stores in Baton Rouge, La. over 6 weeks in February-March 2008) was USA300, the dominant community MRSA strain, and USA100, the main hospital-infection strain. In other words, they found meat that had been contaminated during production by an infected or colonized human, not by a pig. As they say:

…the presence of MRSA in meats may pose a potential threat of infection to individuals who handle the food. … (G)reat attention needs to be taken to prevent the introduction of MRSA from human carriers onto the meats they handle and thereby spreading the pathogen.

As we’ve discussed before, the primary danger from MRSA in meat is not that people will take the bug in by mouth (though that is a danger, since S. aureus because of its toxin production can cause severe foodborne illness — and these researchers found, overall, an S. aureus contamination rate of 46% of their pork samples and 20% of their beef samples). Rather, the danger is that people handling the raw meat will be careless in preparing it, and will colonize themselves by touching the meat and then touching their own noses or mucous membranes, leading to a possible future infection. As reader Rhoda pointed out in a comment last week, people could also infect themselves directly, by getting MRSA-laden juice or blood into an abrasion or cut.

So: Be careful in the kitchen, keep meat separate from other foods, wash cutting boards and knives, and (say it with me, now) wash your hands, wash your hands, wash your hands.

The cite for the new paper: Pu, S. et al. Isolation and Characterization of Methicillin-Resistant Staphylococcus aureus from Louisiana Retail Meats. Appl. Environ. Microbiol. doi:10.1128/AEM.01110-08. Epub ahead of print 31 Oct 08.

Housekeeping note: This is the 16th post I’ve written on MRSA in food animals and/or meat. Providing all the links to the previous posts is starting to obstruct the new news. So if you are looking for all those past posts, go to the labels at the end of this post, below the time-stamp, and click on “food.” You should get something that looks like this.

Filed Under: animals, colonization, community, food, MRSA, MSSA, nosocomial, pigs, ST 398, USA 100, USA 300, zoonotic

New report and recommendations, “Why Infectious Diseases Are a Threat to America”

November 6, 2008 By Maryn Leave a Comment

I’m still catching up post-ICAAC – and in addition am on the road reporting, again. But I’m trying to keep all y’all informed. (That’s a clue to my destination. Where in the US is “y’all” a single noun and “all y’all” the plural? Hint: It’s the same place where “barbecue” is only made of beef… Oh, OK, I’m in Texas, enough with the quiz already.)

While the ICAAC-IDSA meeting was happening, the very good nonprofit organization Trust for America’s Health released a report that, just in time for the election, proposed a policy framework for emerging infections and infectious diseases generally. “Germs Go Global: Why Emerging Infectious Diseases Are a Threat to America” lists five major, ongoing, under-appreciated threats:

  • Emerging infectious diseases that appear without warning (SARS, H5N1)
  • Re-emerging infectious diseases (measles, pertussis/whooping cough)
  • “Neglected” infectious diseases (dengue)
  • Diseases used as agents of bioterrorism (smallpox, anthrax)
  • Rising/spreading antibiotic resistance.

The report makes a number of important, well-argued recommendations for the next administration to consider. Several concern us particularly:

The U.S. government, professional health organizations, academia, health care delivery systems, and industry should expand efforts to decrease the inappropriate use of antimicrobials in human medicine, agriculture and aquaculture.
The U.S. Congress should amend the Orphan Drug Act to explicitly address infectious diseases like MRSA, or create a parallel incentive system to address the unique concerns in this area.

The entire report is worth reading. (If you’re short on time, there is an executive summary that covers the main points.) I recommend it.

Filed Under: drug development, health policy, MRSA

Final report from ICAAC-IDSA 08 (news from ICAAC, 3)

November 4, 2008 By Maryn Leave a Comment

The ICAAC-IDSA (48th Interscience Conference on Antimicrobial Agents and Chemotherapy and 46th annual meeting of the Infectious Diseases Society of America) meeting ended a week ago, and I’m still thrashing my way through the thousands of abstracts.

Here’s my final, highly unscientific selection of papers that caught my eye:

* Evidence that the community-strain clone USA300 is a formidable pathogen: It first appeared in the San Francisco jail in 2001. By last year, it had become the sole MRSA strain found in the jail — it crowded out all others. (P. Tattevin, abstract C2-225)
* Another paper from the same UCSF research group finds that the emergence of USA300 has caused a dramatic increase in bloodstream infections, most of which are diagnosed in the ER, not after patients are admitted to the hospital. (B. Diep, abstract C2-226)
* And the CDC finds that USA300 is picking up additional resistance factors, to clindamycin, tetracycline and mupirocin, the active ingredient in the decolonization ointment Bactroban. (L. McDougal, abstract C1-166)
* An example of the complexity of “search and destroy,” the active surveillance and testing program that seeks to identify colonized patients before they transmit the bug to others in a health care institution: Patients spread the bug within hours, often before test results judging them positive have been returned from the lab. (S. Chang, abstract K-3379b)
* In addition to the report from Spain I posted on during the meeting, there is a report of emerging linezolid resistance in France. (F. Doucet-Populaire, abstract C1-188)
* And in addition to the abundant new news about MRSA in pork, and “pork-MRSA” or ST 398, in humans, over the past few days, there were reports of MRSA in milk in Brazil (W. Gebreyes, abstract C2-1829) and Turkey (S. Turkyilmaz, abstract C2-1832), and beef and chicken in Korea (YJ Kim, abstract C2-1831), as well as ST 398 itself acquiring resistance to additional drugs. (Kehrenberg, abstract C1-171)
* Echoing many earlier findings that MRSA seems most common among the poor, the poorly housed and the incarcerated, BR Makos of the University of Texas found that children are more likely to be diagnosed with the bug if they are indigent, or from the South (which I imagine is a proxy for lower socio-economic status, since the South is a more rural, more poor region). (abstract G2-1314)
* And finally, to the long list of objects (ER curtains, stethoscopes) that harbor MRSA, here are more: The ultrasound probes in emergency rooms (B. Wessman, abstract K-3377). Also: Dentures. (Ick.) (D. Ready, abstract K-3354)

Filed Under: animals, fomites, ICAAC, IDSA, infection control, jail, linezolid, pigs, poor, resistance, ST 398, USA 300, zoonotic

Everyone, everyone, everyone: Vote.

November 4, 2008 By Maryn Leave a Comment

I hope my constant readers outside the US will forgive me for a moment if I speak just to my countrymen.

Folks: This is the most extraordinary election of my lifetime, and I suspect of yours too.
Please vote.
The strength of our democracy depends on the participation of all of us.

And non-US readers, hold a thought in your hearts for us today.
The past eight years have displayed so much that is not good about America.
We profoundly hope for change — and we hope equally to be brave, and civil to each other, in creating it.

Thank you all.

Filed Under: personal

TV stations find MRSA in retail pork in Pacific Northwest

November 3, 2008 By Maryn Leave a Comment

In the comments, Coilin Nunan of the UK’s Soil Association (which published the wonderful 2007 report MRSA in Farm Animals and Meat report) calls attention to a report that I also spotted over the weekend.

A network of TV stations in Washington, Idaho, Oregon and California did a joint report in which they bought 97 packages of ground pork or pork cutlets and sent them to a laboratory for testing. The lab found that three of the packages, all ground pork, contained MRSA.

I believe this is the first time anyone has found (or, perhaps, looked for) MRSA in retail pork in the US. You’ll remember that MRSA ST 398 has been found in meat in Canada and Europe, and in hospital patients in Scotland and the Netherlands, and in pigs in Iowa; and MSSA ST 398 in humans in New York City.

There are some important unanswered questions about this report:

  • We aren’t told the strain. If it’s ST 398, that would be information on the spread of ST 398 in the US. If it’s USA300, on the other hand, it could be contamination from an infected or colonized human, perhaps someone in the preparation chain.
  • We aren’t told the provenance of the pork. Was it bought from a variety of markets, or one chain of supermarkets that might have one regional supplier? Was it organic v. conventional? Small-farm versus feedlot?
  • We can’t draw any broad conclusions from this. I am a poor biostatistician, but to me, this is purely a convenience sample. (If anyone disagrees with me, please weigh in.) In other words, it’s one data point. It says: There is MRSA in these packages of pork — which is an important piece of information — but it doesn’t say: 3% of all US pork contains MRSA.

Also, while the written version of the report that I linked above isn’t bad, overall, it contains one significant error. It says:

This drug-resistant bacteria is already responsible for more deaths in the US than AIDS. What makes MRSA so potentially dangerous is the bacteria can cause sickness just by touching it.

Well, not exactly. The concern with MRSA in meat is that, if you handle it without strict cleanliness, you might become colonized with the bacteria. That is not at all the same as developing a MRSA infection, much less the invasive MRSA the first sentence of that quote refers to. And yes, colonization can lead to infection. But to say that touching MRSA-contaminated meat will inevitably cause an invasive MRSA infection is alarmist.

I’m assuming the stations undertook this because it is sweeps month. (For those who have so far been spared the internals of TV news, “sweeps” are months — usually February, May, July and November — when stations’ audiences are measured to determine market rank and advertising rates. Because it is in the stations’ interest to attract as much audience as possible during those months, sweeps is usually when news stations run big investigative projects.) Interesting that they chose this topic. I think we can take this as an indicator — again, just one data point, but an interesting one — of emerging US concern over MRSA in meat.

Filed Under: animals, food, MRSA, MSSA, pigs, ST 398, zoonotic

New drugs for MRSA, at various experimental stages

November 1, 2008 By Maryn Leave a Comment

As you might guess by the name, ICAAC (the Interscience Conference on Antimicrobial Agents and Chemotherapy) features much research on the pharma side of things. There were many research reports this past week on drugs at various stages that I was intending to write up for you, but I just noticed that Reuters got there first and did quite a good job. So consider checking this story, which discusses PTK 0796, iclaprim, ceftobiprole, dalbavancin and televancin:

Two experimental antibiotics appear to work safely against an increasingly common and dangerous form of infection called methicillin-resistant Staphylococcus aureus or MRSA, researchers said on Sunday.
Doctors are clamoring for drugs that can fight the so-called superbug infection, which kills an estimated 19,000 people a year in the United States alone. (Reuters)

An important consideration that is not much discussed: It is not enough just to have new drugs; what we need are new classes of drugs. That’s because, when staph acquires protection against one drug, it is likely to be acquiring protecting against all chemically similar drugs — thus, not just methicillin but all the synthetic penicillins; not just Keflex but all the first-generation (and second- and third-generation) cephalosporins.

Filed Under: antibiotics, ICAAC, IDSA, MRSA, resistance

Microbes in US meat, but no MRSA

October 30, 2008 By Maryn Leave a Comment

The ICAAC-IDSA meeting has ended, but there are still many abstracts that I have not been through. While I pore over them, though, an interesting paper has just been published that somewhat contradicts earlier research on the presence of MRSA in meat. (Earlier posts are here, here, here, here, here, here, here and here.)

The researchers, from the Warren Alpert Medical School of Brown University and Rhode Island Hospital, bought ground beef, boneless chicken breasts and pork chops from 10 stores in and around Providence. Two stores offered both conventional and “natural” choices, so they bought both, giving them 36 (=[10+2]x3) samples all told. They cultured for MRSA, vancomycin-resistant Enterococcus, extended-spectrum beta-lactamase producing Gram-negative bacteria and E. coli 0157:H7.

And they found… almost nothing. Only one samples grew a resistant microbe, the ESBL Gram-negative Serratia fonticola. A secnd level of testing, however, uncovered four samples carrying S. aureus — but all methicillin-sensitive, not MRSA.

So are we in the clear? Not necessarily. It is, as they say themselves, as small study, in which only a third of the samples were pork, though pigs are the animals most associated with MRSA via the strain ST398. And the presence of S. fonticola is troubling, because it not only causes disease directly (in animals and in humans), but also harbors a plasmid that can transfer resistance to other bacterial strains.

Nevertheless, it is a comforting reminder that, though MRSA has been found in meat, it has not been found everywhere. (Or at least, not in Providence.) Still, we shouldn’t let our personal vigilance lapse. The hypothetical danger from MRSA in meat is not that we’ll swallow it, but rather that we’ll be colonized if we handle the raw meat without being careful enough about kitchen hygiene. So keep raw meat away from other food, wash your cutting boards and counters, and (say it with me, now), wash your hands, wash your hands, wash your hands.

The cite is: Philip A. Chan, Sarah E. Wakeman, Adele Angelone and Leonard A. Mermel, Investigation of multi-drug resistant microbes in retail meats. Journal of Food, Agriculture & Environment, Vol.6 (3&4), July-October 2008.

Filed Under: animals, food, ICAAC, IDSA, MRSA, MSSA, pigs, zoonotic

Outbreak of Zyvox-resistant staph (breaking news from ICAAC 2)

October 27, 2008 By Maryn Leave a Comment

Physicians from Madrid reported today on what’s believed to be the first outbreak of MRSA caused by a strain that was resistant to linezolid, usually known as Zyvox, a relatively new and costly drug that is used for complicated MRSA infections and when older drugs fail.

Linezolid resistance in single cases has been recorded before — the first isolate I can see in a quick scan of the literature dates to 2002 — but this appears to be the first outbreak.

Dr. Miguel Sanchez of the Hospital Clinico San Carlos said the outbreak was discovered April 13, 2008 in an ICU patient and subsequently spread to 11 other patients in the ICU and two elsewhere in the hospital. The patients, 8 men and 4 women, had been in the unit for at least three weeks for a variety of reasons; they were intubated, had central venous catheters, and had been receiving broad-spectrum antibiotics. None of them were colonized with MRSA on admission. The outbreak went on for 12 weeks, until June 27.

It was eventually shut down by a combination of strategies: taking the patients off linezolid in favor of other anti-staph drugs (vancomycin and tigecycline); drastically restricting linezolid use, a policy that is already followed by many US hospitals; checking the patients very frequently for colonization; and cohorting them, which means grouping them together physically, away from uninfected patients, and putting them under isolation.

In a quick briefing with reporters, Sanchez seemed to suggest that the hospital does not believe its infection control failed. The hospital swabbed 91 environmental surfaces (such as bed rails and room furniture) and the hands of 47 health-care personnel and found only one sample that grew the linezolid-resistant strain on a culture. A case-control study to find the cause is being conducted, he said.

Half of the patients died, he said, but not as a result of the linezolid-resistant strain.

Sanchez’ data slides were not available to reporters this evening. (More precisely, they were delivered to the press room, but in a format that wasn’t readable). I’ll update with more details if/when we get access to them. Meanwhile, the cite is: M. De la Torre, M. Sanchez, G. Morales et al. “Outbreak of Linezolid-Resistant Staphylococcus aureus in Intensive Care.” Abstract C2-1835a.

Filed Under: colonization, hand hygiene, hospitals, ICAAC, IDSA, infection control, linezolid, MRSA, nosocomial, Zyvox

ST 398 in New York City – via the Dominican Republic?

October 26, 2008 By Maryn Leave a Comment

Here’s a piece of MRSA news from the ICAAC meeting (see the post just below) that is intriguing enough to deserve its own post.

US and Caribbean researchers have found preliminary evidence of the staph strain ST 398, the animal-origin strain that has caused human illness in the Netherlands and has recently been found in Ontario and Iowa, in Manhattan. How it may have arrived: Via the Dominican Republic.

Th researchers (from Columbia University and Montefiore Medical Center in New York, three institutions in the Dominican Republic and one in Martinique) examine the influence of an “air bridge” — very frequent household travel — that is bringing MRSA and methicillin-sensitive staph back and forth between the Dominican Republic and the immigrant Dominican community at the north end of Manhattan. They compared 81 staph isolates from Dominican Republic residents and 636 from Manhattan residents and, among other findings, say that 6 Dominican strains and 13 Manhattan strains were ST398.

It is the first time ST398 has been found in Manhattan or in the Dominican Republic. (Most likely also the first time anyone has looked.)

The authors observe with some understatement:

Given the history of ST398’s rapid dissemination in the Netherlands, its history of methicillin-resistance and its ability to cause infections in both hospital and community, it will be important to monitor its prevalence in these new regions.

It is important to note that these ST398s were not MRSA — they were MSSA, methicillin-sensitive. However: Earlier this year, the Dutch researchers who have delineated the emergence of ST398 in Holland commented on the diversity of ST398 they have found on different pig farms and hypothesized that the resistance element has been acquired several different times by methicillin-sensitive staph. (van Duijkeren, E. et al. Vet Microbiol 2008 Jan 25; 126(4): 383-9.)

So it is possible to hypothesize that this strain arrived in Manhattan from the more rural Dominican Republic, though with the growth of hobby urban farming in NYC, one could also make the case that transmission went the other way. And it is also possible — I emphasize possible — that this could be a precursor to ST398 MRSA emerging in Manhattan. An interesting thought.

(This research is not online, because it is a poster presented at a medical meeting. For reference, the cite is: C. DuMortier, B. Taylor, J. E. Sanchez et al. “Evidence of S. aureus Transmission Between the USA and the Dominican Republic.” Poster C2-224. 48th ICAAC-46th IDSA, Washington DC, 24-28 Oct 2008.)

Filed Under: animals, community, Dominican Republic, food, ICAAC, IDSA, MRSA, MSSA, New York City, pigs, ST 398, zoonotic

Breaking MRSA news from the ICAAC meeting 1

October 26, 2008 By Maryn Leave a Comment

There are 15,000+ people at the 48th Interscience Conference on Antimicrobial Agents and Chemistry (known as ICAAC – yes, “Ick-ack”) and 46th Infectious Diseases Society of America Annual Meeting, and at least half of them seem interested in MRSA. At the keynote address last night, Dr. Anthony Fauci, director of the National Institute of Allergy and Infectious Diseases at NIH, referred to MRSA as a “global pandemic.”

Here are some highlights — a few of very, very many — from the first two days:

  • MRSA is truly a global phenomenon: Researchers here are reporting on local epidemics in Argentina, Australia, Botswana, Canada, Colombia, Ecuador, Greece, Japan, Nigeria, Peru, South Korea, Sweden and Taiwan.
  • In the United States, USA300 — the virulent community strain that is crowding out all other community strains — continues its dominance. It first appeared in the San Francisco jail in 2001 and now is the only cause of community MRSA infections there. (Tattevin, P. et al. “What Happened After the Introduction of USA300 in Correctional Facilities?” Poster C2-225.)
  • And MRSA continues to demonstrate its protean ability to cause unexpected forms of illness: The number of cases of sinusitis caused by MRSA seen at Georgetown University tripled between 2001-03 and 2004-06. (I. Brook and J. Hausfeld. “Increase in the Frequency of Recovery of Methicillin-Resistant Staphylococcus aureus in Acute and Chronic Maxillary Sinusitis.” Poster C2-228.)
  • Meanwhile, treatment options are shrinking. Hospitalization for vancomycin-resistant pathogens (that is, resistant to vancomycin, the drug of last resort for MRSA) doubled between 2003 and 2005 according to national healthcare utilization databases. (A.M. Ramsey et al. “The Growing Burden of Vancomycin Resistance in US Hospitals, 2000-2005.” Poster K-560.)
  • But, new drugs are beginning to emerge from the pipeline. Early results from a privately held company called Paratek Pharmaceuticals (co-founded by resistance guru Dr. Stuart Levy) showed that their new tetracycline relative PTK 0796 scored as well or slightly better than linezolid (Zyvox) in safety, tolerability and adverse events, and is advancing to a full Phase 3 trial. (R.D. Arbeit et al. “Safety and Efficacy of PTK 0796.” Poster L-1515.)

More as the meeting goes on.

Filed Under: animals, antibiotics, drug development, Europe, hospitals, ICAAC, IDSA, jail, ST 398, vancomycin

MRSA and pets – any experience?

October 24, 2008 By Maryn Leave a Comment

Constant readers, I’m working on a chapter on MRSA in animals and would be curious to hear from anyone who has had experience with MRSA in a pet, whether as an owner/companion or on the veterinary side.

If this is you, please get in touch! Your options are: via the email address in the right-hand column; or via comments here. (I moderate all comments, which means that I see them before they post; so I can read a comment and remove it without its going public, if you prefer.)

Filed Under: animals, MRSA, trolling

Erratic posting ahead

October 24, 2008 By Maryn Leave a Comment

Constant readers: I am headed to the ICAAC/IDSA meeting. (For those not into medical acronyms, that’s the Interscience Conference on Antimicrobial Agents and Chemotherapy, which is the biggest infectious-disease conference of the year that isn’t exclusively about HIV, and which this year is combined with the annual meeting of the Infectious Diseases Society of America, the second biggest. Yes, it’s an infectious-disease geekgasm.)

Posting is likely to be erratic: I expect there to be a ton of MRSA news, but no time to write about it. However, I’ll be throwing things up here as I can, and will also be filing flu news to CIDRAP — though, since CIDRAP doesn’t publish on weekends, don’t expect anything there til Monday or Tuesday.

See you on the far side.

Filed Under: lame excuses

Much new news on hospital-acquired infections

October 23, 2008 By Maryn Leave a Comment

There’s a ton of new, and conflicting, findings on prevention and detection of hospital-acquired MRSA and other infections.

First: Today, in the journal Infection Control and Hospital Epidemiology, three researchers from Virginia Commonwealth University add to the ferocious debate on “search and destroy,” the colloquial name for active surveillance and testing: that is, checking admitted patients for MRSA, isolating them until you have a result, and and if they are positive, treating them while continuing to isolate them until they are clear. “Search and destroy” has kept in-hospital MRSA rates very low in Europe, and has proven successful in some hospitals in the United States; in addition, four states (Pennsylvania, Illinois, California and New Jersey) have mandated it for some admitted patients at least. Nevertheless, it remains a controversial tactic, with a variety of arguments levelled against it, many of them based on cost-benefit.

Comes now Richard P. Wenzel, M.D., Gonzalo Bearman, M.D., and Michael B. Edmond, M.D., of the VCU School of Medicine, to say that the moment for MRSA search and destroy has already passed, because hospitals are now dealing with so many highly resistant bugs (Acinetobacter, vancomycin-resistant enterococci (VRE), and so on). They contend that hospitals would do better to pour resources into aggressive infection-control programs that broadly target a spectrum of HAIs.

The abstract is here and the cite is: Richard P. Wenzel, MD, MSc; Gonzalo Bearman, MD, MPH; Michael B. Edmond, MD, MPH, MPA. Screening for MRSA: A Flawed Hospital Infection Control Intervention. Infection Control and Hospital Epidemiology 2008 29:11, 1012-1018.

Meanwhile, the US Government Accountability Office recently released a substantive examination of HAI surveillance and response programs, in states and in hospitals, that looks at:

  • the design and implementation of state HAI public reporting systems,
  • the initiatives hospitals have undertaken to reduce MRSA infections, and
  • the experience of certain early-adopting hospitals in overcoming challenges to implement such initiatives. (from the cover letter)

The report is too thick to summarize here, but here are some key points:

  • No two places are doing this the same way — which means that data still does not match state to state
  • Experts are still divided about how much MRSA control is necessary
  • Hospitals that have undertaken MRSA-reduction programs have taken different paths
  • But MRSA control does work: It does reduce in-hospital infections, but at a cost.

This report is an important bookend to an earlier GAO report from last April that explored the poor state of MRSA surveillance nationwide. Read it if you wonder why we don’t really know how much MRSA – in hospitals or in the community – we have.

I am stillworking my way through the new Compendium of Strategies to Prevent Healthcare-Associated Infections in Acute Care Hospitals, released a week ago by a slew of health agencies (Joint Commission, CDC, et al.) and health organizations (American Hospital Association, ACIP, SHEA, IDSA et al.), to see how much the MRSA strategies have actually changed. If anyone has any comments, please weigh in!

Filed Under: CDC, colonization, control, hand hygiene, health policy, HICPAC, infection control, medical errors, nosocomial, surveillance

MRSA in sports

October 21, 2008 By Maryn Leave a Comment

I am possibly the most sports-impaired person on the planet (a consequence of growing up with the lovely but impenetrable game of cricket), but even I noticed these stories recently.

  • University of North Carolina-Asheville basketball center Kenny George has lost part of his right foot to amputation as the result of a staph infection.
  • Cleveland Browns tight end Kellen Winslow has emotionally gone public — to the displeasure of his coaches — with the news that he was hospitalized for three days for a staph infection. Winslow has been struggling with MRSA since 2005, when he had a motorbike accident, had surgery, and developed a post-surgical infection. Four other Browns players — Braylon Edwards, Joe Jurevicius, LeCharles Bentley and Brian Russell — have had MRSA as well.

MRSA in sports is not new news, but the prominence of some of its victims has brought great attention to the bug: For instance, Redskins defensive tackle Brandon Noble, who was sidelined for a season, and eventually ended his career, over a MRSA infection following arthroscopic knee surgery. And it is not limited to pro players: Lycoming College senior Ricky Lanetti died in 2003 from an overwhelming MRSA infection that began as a pimple-like “spider bite” lesion.

There has been so much concern about MRSA among schools and parents that the CDC has issued specific advice for sports programs. Some of the reasons why athletes may be vulnerable are well-understood: They work in crowded conditions, they undergo a lot of skin-to-skin contact, they are likely to get scraped and injured, and they may not get clean immediately (especially high school players — does anyone shower after high school sports any more?).

But some factors, such as the role of artificial turf, are still murky. An investigation of eight MRSA infections among the St. Louis Rams in the 2003 season (first author Sophia Kazakova) found that linemen and linebackers were more likely to develop MRSA, possibly because they ended up with more turf abrasions. On the other hand, an investigation of 10 infections among players at Sacred Heart University in Connecticut (first author Elizabeth Begier) found that, while turf burns played a role, a contaminated team whirlpool — and sharing razors for shaving body hair — did too.

Filed Under: basketball, CDC, community, football, MRSA, schools, sports

How to wash your hands, a tutorial

October 20, 2008 By Maryn Leave a Comment

More still to come on hospital-acquired infections. (No, really. I mean it.) But first:

Somehow I sadly missed that last Wednesday, Oct. 15, was Global Handwashing Day, sponsored by the World Bank, CDC, UNICEF and a number of other organizations including several soap manufacturers. Here’s a BBC story describing massive social mobilization efforts that were supposed to take place across South Asia last week. (Can any Asian readers report in whether they saw anything? Mumbai and Hyderabad readers, I’m looking at you.)

Though we missed the festivities, here’s an excellent take-away: A great series of videos produced by the Grey-Bruce Health Unit, a local health department northwest of Toronto, about the right way to wash hands with soap and water and/or alcohol gel.

Filed Under: hand hygiene, infection control

Sign of the times: Taking your own cleaning materials to the hospital

October 14, 2008 By Maryn Leave a Comment


There are several new and important reports out on hospital-acquired infections (HAIs) that I hope to get to this week, but I spotted something today that I just had to highlight first:

Constant readers may know that I’ve done a lot of reporting in the developing world. In parts of Asia and Africa, it is assumed that patients or their families bring food to the hospital. People do not trust the hospitals to feed them, with good reason: Hospitals can’t afford it. Provision of food in the hospital, which we take for granted, is not part of the health-care culture. (In particularly poor countries, the family may feed not only the patient, but the health care workers taking care of the patient as well.)

Here now is an industrialized-world version of that developing-world practice. A company in England (which, as we’ve discussed, has ferocious rates of hospital MRSA and C. difficile) has begun marketing the PatientPak, the “world’s first personal anti-superbug kit.” It’s a $28 sample-sized collection of antimicrobial hair and body wash, hand wipes, hand sanitizer and a germ-killing spray for sheets and cubicle curtains, along with lip balm, bar soap, and a disposable nail brush and pen.

It’s entirely possible that using products like this might protect a patient from some hospital-acquired infections; the company suggests that a patient use the wipes and the hand spray when going to and from the bathroom or after touching any surfaces. But the difficult reality, of course, is that most hospital-acquired infections are not the patient’s fault: They are due to infection-control breaches by hospital staff, something over which a patient — with antimicrobial wipes or without — has little control.

This company will probably sell quite a few of these kits — and I don’t know that I can criticize them for doing so. If one of my family members was being admitted to hospital, I might well send something like this with them. But what a sad commentary on our own health-care culture that any of us would consider this necessary.

Filed Under: antibacterial, disinfection, hospitals, human factors, infection control, MRSA, nosocomial, UK

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